# 使用 Homebrew, apt 安装 proteinortho

查看 proteinortho 的安装路径、可执行文件、元数据以及面向 AI 代理工作流的安全说明。

## 安装

```sh
sudo av install brew:proteinortho
```

其他安装命令:

### macOS

- Homebrew (100%):

```sh
brew install proteinortho
```

  证据: local Homebrew formula metadata

### Linux

- Debian apt (92%):

```sh
sudo apt install proteinortho
```

  证据: Debian stable package indexes: proteinortho from https://deb.debian.org/debian/dists/stable/main/binary-amd64/Packages.xz

## 软件包事实

- **软件包键:** brew:proteinortho
- **软件包管理器:** Homebrew
- **版本:** 6.3.6
- **来源摘要:** Detecting orthologous genes within different species
- **主页:** <https://gitlab.com/paulklemm_PHD/proteinortho>
- **最后更新:** 2026-06-25T13:38:03+02:00
- **已生成:** 2026-08-03T19:37:03+00:00

## 可执行文件

- proteinortho (别名)
- proteinortho2html.pl (别名)
- proteinortho2tree.pl (别名)
- proteinortho2xml.pl (别名)
- proteinortho6.pl (别名)
- proteinortho_cleanupblastgraph (别名)
- proteinortho_clustering (别名)
- proteinortho_compareProteinorthoGraphs.pl (别名)
- proteinortho_do_mcl.pl (别名)
- proteinortho_extract_from_graph.pl (别名)
- proteinortho_ffadj_mcs.py (别名)
- proteinortho_formatUsearch.pl (别名)
- proteinortho_grab_proteins.pl (别名)
- proteinortho_graphMinusRemovegraph (别名)
- proteinortho_history.pl (别名)
- proteinortho_singletons.pl (别名)
- proteinortho_summary.pl (别名)

## 安装行为

- Bottle: 不可用

## 版本和新鲜度

- 页面生成时间: 2026-08-03
- 管理器版本: 6.3.6

## 安全说明

infrastructure mutation or orchestration signal.

- **Geiger 风险:** orange / 中
- infrastructure mutation or orchestration signal

## 其他软件包管理器记录

- Debian apt - proteinortho - 6.3.1+dfsg-1: normalized package name match | Debian stable package indexes: proteinortho from https://deb.debian.org/debian/dists/stable/main/binary-amd64/Packages.xz | Detection of (Co-)orthologs in large-scale protein analysis | https://gitlab.com/paulklemm_PHD/proteinortho
- Ubuntu apt - proteinortho - 6.3.1+dfsg-1: normalized package name match | Ubuntu 24.04 LTS package indexes: proteinortho from https://archive.ubuntu.com/ubuntu/dists/noble/universe/binary-amd64/Packages.gz | Detection of (Co-)orthologs in large-scale protein analysis | https://gitlab.com/paulklemm_PHD/proteinortho


## Combined YAML source

View the package source record on GitHub. [combined/proteinortho.yml](https://github.com/mxcl/pkgdb/blob/main/combined/proteinortho.yml)


## 来源

- pkg.so package database
- Geiger risk classifier
- pkgdb category and tag curation
- external package-manager database matches
- cross-ecosystem install command graph