macOS
Homebrew已验证 · 100%
brew install nanoqlocal Homebrew formula metadata
安装
其他安装命令
概览
软件包摘要
Minimal but speedy quality control and summaries of nanopore reads
历史
项目历史与用法
Nanoq is a Rust command-line utility for rapid filtering, trimming, quality control, and summary reporting of Oxford Nanopore FASTA/FASTQ reads. It is designed to work with files or Unix streams and emphasizes low memory use and high throughput.
项目历史
The public repository and first tagged releases appeared in March 2020. The project subsequently expanded its filters, reports, compression support, and machine-readable output, reaching the 0.8 series in 2021, 0.9.0 in 2022, and 0.10.0 in 2023. Steinig and Coin described Nanoq in the Journal of Open Source Software in 2022.
采用历史
Nanoq is distributed through Cargo, Conda/Bioconda, precompiled Linux and macOS release archives, and a Homebrew formula. Its official benchmarks position it alongside established sequencing utilities including NanoFilt, NanoStat, Filtlong, seqtk, SeqKit, and rust-bio-tools.
使用方式
Users pass FASTA or FASTQ reads by file or standard input, apply length or quality filters and optional end trimming, and send surviving reads to a file or standard output. Statistics can be emitted as compact text, verbose summaries, or JSON; a fast mode skips quality-score calculation for greater throughput.
为什么软件包爱好者会关心
Nanoq is notable as a small, single-purpose Rust CLI that composes naturally in Unix pipelines while being packaged across the Rust, bioinformatics, binary-release, and Homebrew ecosystems. Its benchmarked trade-off between full quality calculations and an exceptionally fast quality-free mode makes it useful when choosing lightweight tools for large sequencing streams.
时间线
- 2020: First public tagged releases.
- 2021: The 0.8 release series broadened the mature CLI.
- 2022: Nanoq was published in the Journal of Open Source Software and version 0.9.0 was released.
- 2023: Version 0.10.0 was released.
Related projects
- NanoFilt and NanoStat provide nanopore filtering and statistics workflows used as official benchmark comparisons.
- Filtlong, seqtk, SeqKit, and rust-bio-tools are neighboring read-processing tools compared in Nanoq's official benchmarks.
- Needletail and niffler provide Nanoq's read-processing and compression foundations.
来源
- https://github.com/esteinig/nanoq
- https://github.com/esteinig/nanoq/releases
- https://joss.theoj.org/papers/10.21105/joss.02991
- source_facts.package-manager.brew
安全态势
尚未找到受保护工具覆盖
没有找到 nanoq 的匹配本地密钥处理 manifest。软件包元数据仍在此发布，以便未来覆盖拥有稳定的软件包 URL。
安装行为
- formula 元数据中未记录 Homebrew post-install 钩子。
- Homebrew bottle 元数据适用于 6 个平台目标。
- 构建元数据列出 1 个构建依赖。
建议审查
在无人值守的代理使用前，请检查该工具是否读取明文凭据、写入远程状态、发布制品或调用插件。
可执行文件
已安装的可执行文件
| 命令 | 类型 | 暴露范围 | 备注 |
|---|---|---|---|
nanoq | cli | 全局可执行文件 |
新鲜度
版本和新鲜度
这些信号区分页生成时间、软件包管理器活动和上游发布比较。只有存在证据 URL 和可比较版本时，才会提示版本落后。
页面生成时间2026-08-04
管理器版本0.10.0
管理器更新时间2026-07-14
本地数据OK
上游当前
检测到的最新版本0.10.0
https://github.com/esteinig/nanoq
- OK没有生成新鲜度警告。
安装元数据
软件包元数据
| 软件包键 | brew:nanoq |
|---|---|
| 版本 | 0.10.0 |
| 软件包管理器 | Homebrew |
| 软件包管理器页面 | https://formulae.brew.sh/formula/nanoq |
| 主页 | https://github.com/esteinig/nanoq |
| 仓库 | https://github.com/esteinig/nanoq |
| 许可证 | MIT |
| 源码归档 | https://github.com/esteinig/nanoq/archive/refs/tags/0.10.0.tar.gz |
| 最后更新 | 2026-07-14T06:59:42Z |
| Pulse | updated |
| 构建依赖 | rust |
| Bottle | 可用 (于 arm64_linux, arm64_sequoia, arm64_sonoma, arm64_tahoe, sonoma, x86_64_linux) |
| Homebrew post-install | 未定义 |
| 服务 | 未声明 |
注册表事实
源数据库详情
| Source Database | Homebrew formula API |
|---|---|
| Tap | homebrew/core |
| Full Name | nanoq |
| Version Scheme | 0 |
| Revision | 0 |
| Head Version | HEAD |
| Bottle Stable Root URL | https://ghcr.io/v2/homebrew/core |
| Deprecated | no |
| Disabled | no |
| Keg Only | no |
| URL Keys |
|
来源线索
由仓库数据生成
此页面由 av-web 从 scripts/generate-pkg-sqlite.py 生成的私有软件包 SQLite 工件提供。
Combined YAML source
View the package source record on GitHub.
使用的来源
- cross-ecosystem install command graph
- curated package history
- package relationship graph
- package version freshness
- package-page enrichment
- pkg.so package database
- pkgdb category and tag curation