# 使用 Homebrew 安装 minibwa

查看 minibwa 的安装路径、可执行文件、元数据以及面向 AI 代理工作流的安全说明。

## 安装

```sh
sudo av install brew:minibwa
```

其他安装命令:

### macOS

- Homebrew (100%):

```sh
brew install minibwa
```

  证据: local Homebrew formula metadata

## 软件包事实

- **软件包键:** brew:minibwa
- **软件包管理器:** Homebrew
- **软件包管理器页面:** <https://formulae.brew.sh/formula/minibwa>
- **版本:** 0.6
- **来源摘要:** Successor of BWA-MEM for short-read alignment
- **主页:** <https://github.com/lh3/minibwa>
- **仓库:** <https://github.com/lh3/minibwa>
- **许可证:** MIT AND Apache-2.0
- **源码归档:** <https://github.com/lh3/minibwa/archive/refs/tags/v0.6.tar.gz>
- **最后更新:** 2026-07-30T15:48:22Z
- **已生成:** 2026-08-04T22:13:35+00:00

## 可执行文件

- minibwa (cli)
- minibwa (别名)

## 安装行为

- post-install 钩子: 未定义
- Bottle: 可用 于 arm64_linux, arm64_sequoia, arm64_sonoma, arm64_tahoe, sonoma, x86_64_linux

## 版本和新鲜度

- 页面生成时间: 2026-08-04
- 管理器版本: 0.6
- 管理器更新时间: 2026-07-30
- 本地数据: OK
- 上游仓库: https://github.com/lh3/minibwa
- 检测到的最新版本: v0.6 (当前)
## 项目历史与用法

minibwa is a genomic read aligner from the BWA/minimap2 lineage. The repository identifies it as the successor of BWA-MEM for short-read alignment, and the arXiv preprint by Heng Li and Nils Homer presents it as a next iteration of BWA-MEM for standard whole-genome short reads, Hi-C reads, accurate long reads, and directional bisulfite sequencing data.

### 项目历史

The design deliberately mixes earlier tools by the same lineage: a BWA-MEM-style BWT/FM-index and variable-length seed search, ropebwt3-inspired supermaximal exact-match work, and minimap2-style chaining plus SIMD-based base alignment. The authors report comparable accuracy with much higher speed than BWA-MEM and BWA-MEM2, while noting that exact BWA-MEM compatibility is traded for algorithmic improvement.

### 使用方式

In practice, minibwa is a bioinformatics command-line aligner for pipelines that map sequencing reads to a reference genome before variant calling, methylation analysis, or related downstream analysis. Its package-manager niche is narrow but important: it gives genomics users an installable replacement candidate for BWA-MEM where performance and support for newer read types matter more than byte-for-byte legacy output.

### 来源

- <https://arxiv.org/abs/2606.15357>
- <https://arxiv.org/html/2606.15357v1>
- <https://github.com/lh3/bwa>
- <https://github.com/lh3/minibwa>


## 安全说明

没有找到 minibwa 的匹配本地密钥处理 manifest。软件包元数据仍在此发布，以便未来覆盖拥有稳定的软件包 URL。


## 源数据库详情

- **Source Database:** Homebrew formula API
- **Tap:** homebrew/core
- **Full Name:** minibwa
- **Version Scheme:** 0
- **Revision:** 0
- **Bottle Stable Root URL:** <https://ghcr.io/v2/homebrew/core>
- **Deprecated:** no
- **Disabled:** no
- **Keg Only:** no
- **URL Keys:** stable


## 相关链接

- [Source-control packages](https://pkg.so/zh-hans/source-control-tools/) - Belongs to a source-control command family.
- [Terminal utility packages](https://pkg.so/zh-hans/terminal-utilities/) - Matched terminal and command-line workflow metadata.
- [Networking and protocol packages](https://pkg.so/zh-hans/networking-protocol-tools/) - Matched network, protocol, or remote-service metadata.
- [Scientific computing packages](https://pkg.so/zh-hans/scientific-computing-tools/) - Matched scientific computing metadata.
- [blast](https://pkg.so/zh-hans/brew/blast/) - Shares pkgdb curated category or tags: bioinformatics, cli, genomics, science, sequence-alignment.
- [minimap2](https://pkg.so/zh-hans/brew/minimap2/) - Shares pkgdb curated category or tags: bioinformatics, cli, genomics, science, sequence-alignment.
- [mummer](https://pkg.so/zh-hans/brew/mummer/) - Shares pkgdb curated category or tags: bioinformatics, cli, genomics, science, sequence-alignment.
- [lastz](https://pkg.so/zh-hans/brew/lastz/) - Shares pkgdb curated category or tags: bioinformatics, cli, genomics, science, sequence-alignment.
- [samtools](https://pkg.so/zh-hans/brew/samtools/) - Shares pkgdb curated category or tags: bioinformatics, cli, genomics, science.
- [diamond](https://pkg.so/zh-hans/brew/diamond/) - Shares pkgdb curated category or tags: bioinformatics, cli, science, sequence-alignment.
- [bedtools](https://pkg.so/zh-hans/brew/bedtools/) - Shares pkgdb curated category or tags: bioinformatics, cli, genomics, science.
- [mafft](https://pkg.so/zh-hans/brew/mafft/) - Shares pkgdb curated category or tags: bioinformatics, cli, science, sequence-alignment.
- [bwa](https://pkg.so/zh-hans/brew/bwa/) - Local package facts share a topical domain. Shared terms: alignment, bioinformatics, bwa, cli, science.
- [polypolish](https://pkg.so/zh-hans/brew/polypolish/) - Local package facts share a topical domain. Shared terms: bioinformatics, cli, genomics, read, science.

## Combined YAML source

View the package source record on GitHub. [combined/minibwa.yml](https://github.com/mxcl/pkgdb/blob/main/combined/minibwa.yml)


## 来源

- pkg.so package database
- package-page enrichment
- curated package history
- package version freshness
- pkgdb category and tag curation
- package relationship graph
- cross-ecosystem install command graph