# paml を Homebrew, apt, Nix でインストール

paml のインストール経路、実行ファイル、メタデータ、AI エージェント向けセキュリティノートを確認します。

## インストール

```sh
sudo av install brew:paml
```

追加のインストールコマンド:

### macOS

- Homebrew (100%):

```sh
brew install paml
```

  証拠: local Homebrew formula metadata

### Linux

- Debian apt (92%):

```sh
sudo apt install paml
```

  証拠: Debian stable package indexes: paml from https://deb.debian.org/debian/dists/stable/main/binary-amd64/Packages.xz

- Nix (92%):

```sh
nix profile install nixpkgs#paml
```

  証拠: nixpkgs package indexes: pkgs/by-name/pa/paml/package.nix from https://api.github.com/repos/NixOS/nixpkgs/git/trees/master?recursive=1

## パッケージ情報

- **パッケージキー:** brew:paml
- **パッケージマネージャ:** Homebrew
- **バージョン:** 4.10.10
- **ソース概要:** Phylogenetic analyses of DNA or protein sequences using maximum likelihood
- **ホームページ:** <https://github.com/abacus-gene/paml>
- **リポジトリ:** <https://github.com/abacus-gene/paml>
- **生成日時:** 2026-08-03T19:37:03+00:00

## 実行可能ファイル

- baseml (エイリアス)
- basemlg (エイリアス)
- chi2 (エイリアス)
- codeml (エイリアス)
- evolver (エイリアス)
- infinitesites (エイリアス)
- mcmctree (エイリアス)
- pamp (エイリアス)
- yn00 (エイリアス)

## インストール挙動

- Bottle: 利用不可

## バージョンと鮮度

- ページ生成日: 2026-08-03
- マネージャ版: 4.10.10

## セキュリティノート

narrow executable package without higher-risk signals.

- **Geiger リスク:** グリーン / 低
- narrow executable package without higher-risk signals

## 他のパッケージマネージャ記録

- Debian apt - paml - 4.9j+dfsg-6: normalized package name match | Debian stable package indexes: paml from https://deb.debian.org/debian/dists/stable/main/binary-amd64/Packages.xz | Phylogenetic Analysis by Maximum Likelihood (PAML) | http://abacus.gene.ucl.ac.uk/software/paml.html
- Debian apt - paml-doc - 4.9j+dfsg-6: normalized package name match | Debian stable package indexes: paml-doc from https://deb.debian.org/debian/dists/stable/main/binary-amd64/Packages.xz | Documentation for PAML | http://abacus.gene.ucl.ac.uk/software/paml.html
- Nix - paml: normalized package name match | nixpkgs package indexes: pkgs/by-name/pa/paml/package.nix from https://api.github.com/repos/NixOS/nixpkgs/git/trees/master?recursive=1
- Ubuntu apt - paml - 4.9j+dfsg-4: normalized package name match | Ubuntu 24.04 LTS package indexes: paml from https://archive.ubuntu.com/ubuntu/dists/noble/universe/binary-amd64/Packages.gz | Phylogenetic Analysis by Maximum Likelihood (PAML) | http://abacus.gene.ucl.ac.uk/software/paml.html
- Ubuntu apt - paml-doc - 4.9j+dfsg-4: normalized package name match | Ubuntu 24.04 LTS package indexes: paml-doc from https://archive.ubuntu.com/ubuntu/dists/noble/universe/binary-amd64/Packages.gz | Documentation for PAML | http://abacus.gene.ucl.ac.uk/software/paml.html
- Debian apt - evolver - 2.70+ds-8: installed executable or alias match | Debian stable package indexes: evolver from https://deb.debian.org/debian/dists/stable/main/binary-amd64/Packages.xz | Surface Evolver | https://facstaff.susqu.edu/brakke/evolver/evolver.html
- Debian apt - evolver-doc - 2.70+ds-8: installed executable or alias match | Debian stable package indexes: evolver-doc from https://deb.debian.org/debian/dists/stable/main/binary-amd64/Packages.xz | Surface Evolver - doc | https://facstaff.susqu.edu/brakke/evolver/evolver.html
- Debian apt - evolver-nox - 2.70+ds-8+b2: installed executable or alias match | Debian stable package indexes: evolver-nox from https://deb.debian.org/debian/dists/stable/main/binary-amd64/Packages.xz | Surface Evolver - with no X support | https://facstaff.susqu.edu/brakke/evolver/evolver.html
- Debian apt - evolver-ogl - 2.70+ds-8+b2: installed executable or alias match | Debian stable package indexes: evolver-ogl from https://deb.debian.org/debian/dists/stable/main/binary-amd64/Packages.xz | Surface Evolver - with OpenGL display | https://facstaff.susqu.edu/brakke/evolver/evolver.html


## Combined YAML source

View the package source record on GitHub. [combined/paml.yml](https://github.com/mxcl/pkgdb/blob/main/combined/paml.yml)


## ソース

- pkg.so package database
- Geiger risk classifier
- pkgdb category and tag curation
- external package-manager database matches
- cross-ecosystem install command graph