# mrbayes を Homebrew, apt, Nix, winget でインストール mrbayes のインストール経路、実行ファイル、メタデータ、AI エージェント向けセキュリティノートを確認します。 ## インストール ```sh sudo av install brew:mrbayes ``` 追加のインストールコマンド: ### macOS - Homebrew (100%): ```sh brew install mrbayes ``` 証拠: local Homebrew formula metadata ### Linux - Debian apt (92%): ```sh sudo apt install mrbayes ``` 証拠: Debian stable package indexes: mrbayes from https://deb.debian.org/debian/dists/stable/main/binary-amd64/Packages.xz - Nix (92%): ```sh nix profile install nixpkgs#mrbayes ``` 証拠: nixpkgs package indexes: pkgs/by-name/mr/mrbayes/package.nix from https://api.github.com/repos/NixOS/nixpkgs/git/trees/master?recursive=1 ### Windows - winget (92%): ```sh winget install --id NBIS.MrBayes -e ``` 証拠: Windows Package Manager source index: NBIS.MrBayes from https://cdn.winget.microsoft.com/cache/source.msix ## パッケージ情報 - **パッケージキー:** brew:mrbayes - **パッケージマネージャ:** Homebrew - **バージョン:** 3.2.7a - **ソース概要:** Bayesian inference of phylogenies and evolutionary models - **ホームページ:** - **リポジトリ:** - **最終更新:** 2026-07-29T14:13:07+09:00 - **生成日時:** 2026-08-03T19:37:03+00:00 ## 実行可能ファイル - mb (エイリアス) ## インストール挙動 - Bottle: 利用不可 ## バージョンと鮮度 - ページ生成日: 2026-08-03 - マネージャ版: 3.2.7a ## プロジェクトの歴史と使われ方 MrBayes is a phylogenetics program for Bayesian inference and model choice across evolutionary models. John P. Huelsenbeck and Fredrik Ronquist introduced MRBAYES in Bioinformatics in 2001 as software for Bayesian inference of phylogeny using a variant of Markov chain Monte Carlo. The project later became associated with MrBayes 3, cited for Bayesian phylogenetic inference under mixed models, and MrBayes 3.2, cited for efficient inference and model selection across a large model space. ### プロジェクトの歴史 The program's technical role is to make Bayesian phylogenetic analysis accessible through a command-line tool named mb. The official site lists support for nucleotide, amino-acid, restriction-site, and morphological data; mixed data types in one analysis; partitioned models with linked or unlinked parameters; many nucleotide and amino-acid rate matrices; clock trees; topology constraints; convergence diagnostics; stepping-stone model-likelihood estimation; MPI parallel jobs; BEAGLE acceleration; and checkpointing. ### 使われ方 MrBayes is a research package more than a general developer tool. Its manual says new users are served by a manual with tutorials, model discussions, FAQ material, and differences between versions 2 and 3, while published analyses are expected to cite the relevant MrBayes papers and optional parallel or BEAGLE-method papers. The GitHub repository notes that after release 3.2.6 in November 2015 the project entered maintenance mode under the National Bioinformatics Infrastructure Sweden, with the original development team still involved and future work oriented mainly toward bug fixes. Package managers expose it as a command-line scientific application for reproducible phylogenetic workflows. ### ソース - - - - - - ## セキュリティノート narrow executable package without higher-risk signals. - **Geiger リスク:** グリーン / 低 - narrow executable package without higher-risk signals ## 他のパッケージマネージャ記録 - Debian apt - mrbayes - 3.2.7a-7+b1: normalized package name match | Debian stable package indexes: mrbayes from https://deb.debian.org/debian/dists/stable/main/binary-amd64/Packages.xz | Bayesian Inference of Phylogeny | http://mrbayes.csit.fsu.edu/ - Debian apt - mrbayes-doc - 3.2.7a-7: normalized package name match | Debian stable package indexes: mrbayes-doc from https://deb.debian.org/debian/dists/stable/main/binary-amd64/Packages.xz | Bayesian Inference of Phylogeny - manual | http://mrbayes.csit.fsu.edu/ - Debian apt - mrbayes-mpi - 3.2.7a-7+b1: normalized package name match | Debian stable package indexes: mrbayes-mpi from https://deb.debian.org/debian/dists/stable/main/binary-amd64/Packages.xz | Bayesian Inference of Phylogeny - mpi version | http://mrbayes.csit.fsu.edu/ - Nix - mrbayes: normalized package name match | nixpkgs package indexes: pkgs/by-name/mr/mrbayes/package.nix from https://api.github.com/repos/NixOS/nixpkgs/git/trees/master?recursive=1 - Ubuntu apt - mrbayes - 3.2.7a-7build2: normalized package name match | Ubuntu 24.04 LTS package indexes: mrbayes from https://archive.ubuntu.com/ubuntu/dists/noble/universe/binary-amd64/Packages.gz | Bayesian Inference of Phylogeny | http://mrbayes.csit.fsu.edu/ - Ubuntu apt - mrbayes-doc - 3.2.7a-7build2: normalized package name match | Ubuntu 24.04 LTS package indexes: mrbayes-doc from https://archive.ubuntu.com/ubuntu/dists/noble/universe/binary-amd64/Packages.gz | Bayesian Inference of Phylogeny - manual | http://mrbayes.csit.fsu.edu/ - Ubuntu apt - mrbayes-mpi - 3.2.7a-7build2: normalized package name match | Ubuntu 24.04 LTS package indexes: mrbayes-mpi from https://archive.ubuntu.com/ubuntu/dists/noble/universe/binary-amd64/Packages.gz | Bayesian Inference of Phylogeny - mpi version | http://mrbayes.csit.fsu.edu/ - winget - NBIS.MrBayes: normalized package name match | Windows Package Manager source index: NBIS.MrBayes from https://cdn.winget.microsoft.com/cache/source.msix ## Combined YAML source View the package source record on GitHub. [combined/mrbayes.yml](https://github.com/mxcl/pkgdb/blob/main/combined/mrbayes.yml) ## ソース - pkg.so package database - Geiger risk classifier - curated package history - pkgdb category and tag curation - external package-manager database matches - cross-ecosystem install command graph