# morpheus を Homebrew でインストール

morpheus のインストール経路、実行ファイル、メタデータ、AI エージェント向けセキュリティノートを確認します。

## インストール

```sh
sudo av install brew:morpheus
```

追加のインストールコマンド:

### macOS

- Homebrew (100%):

```sh
brew install morpheus
```

  証拠: local Homebrew formula metadata

## パッケージ情報

- **パッケージキー:** brew:morpheus
- **パッケージマネージャ:** Homebrew
- **パッケージマネージャページ:** <https://formulae.brew.sh/formula/morpheus>
- **バージョン:** 2.4.1
- **ソース概要:** Modeling environment for multi-cellular systems biology
- **ホームページ:** <https://morpheus.gitlab.io/>
- **上流ドキュメント:** <https://morpheus.gitlab.io/>
- **ライセンス:** BSD-3-Clause
- **ソースアーカイブ:** <https://gitlab.com/morpheus.lab/morpheus/-/archive/v2.4.1/morpheus-v2.4.1.tar.gz>
- **最終更新:** 2026-07-30T09:30:23Z
- **生成日時:** 2026-08-04T22:13:35+00:00

## 実行可能ファイル

- morpheus (cli)
- morpheus-gui (cli)
- morpheus (エイリアス)
- morpheus-gui (エイリアス)

## 依存関係

- boost
- ffmpeg
- graphviz
- libomp
- libtiff
- qt@5

## ビルド依存関係

- cmake
- doxygen
- ninja

## macOS 提供ライブラリ

- bzip2
- libxml2

## インストール挙動

- post-install フック: 未定義
- Bottle: 利用可能 対象 arm64_linux, arm64_sequoia, arm64_sonoma, arm64_tahoe, sonoma, x86_64_linux

## バージョンと鮮度

- ページ生成日: 2026-08-04
- マネージャ版: 2.4.1
- マネージャ更新日: 2026-07-30
- ローカルデータ: OK
- 上流リポジトリ: https://morpheus.gitlab.io/
- 情報: Release/tag comparison is only available for GitHub repositories.
## プロジェクトの歴史と使われ方

Morpheus is a TU Dresden-centered modeling and simulation environment for multiscale and multicellular systems biology. The project page describes it as a tool for coupling ordinary differential equations, partial differential equations, and cellular Potts models in 2D or 3D, with a declarative GUI workflow and a MorpheusML model-description language. The GitLab project credits Jörn Starruß, Justin Bürger, and other TU Dresden contributors.

### プロジェクトの歴史

A major milestone for the software was the 2014 Bioinformatics article by Jörn Starruß, Walter de Back, Lutz Brusch, and Andreas Deutsch, which presented Morpheus as a user-friendly environment for integrating cell-based models with ODE and reaction-diffusion systems. The paper emphasized model construction in biological and mathematical terms rather than programming code, plus support for simulation, visualization, archiving, and batch processing.

### 使われ方

In practice, Morpheus is used by computational biology researchers and educators to build shareable multicellular models, run simulations, visualize output, and perform parameter scans. Its package-manager role is unusual for Homebrew: it ships both command-line and GUI entry points, making a research desktop application available through a developer-oriented package manager.

### ソース

- <https://formulae.brew.sh/formula/morpheus>
- <https://gitlab.com/morpheus.lab/morpheus>
- <https://morpheus.gitlab.io/>
- <https://morpheus.gitlab.io/publication/2014/01/17/morpheus-a-user-friendly-modeling-environment-for-multiscale-and-multicellular-systems-biology/>


## セキュリティノート

morpheus に一致するローカルシークレット処理マニフェストは見つかりませんでした。将来の対応で安定したパッケージ URL を使えるよう、パッケージメタデータはここに公開されています。


## ソースデータベース詳細

- **Source Database:** Homebrew formula API
- **Tap:** homebrew/core
- **Full Name:** morpheus
- **Version Scheme:** 0
- **Revision:** 0
- **Bottle Stable Root URL:** <https://ghcr.io/v2/homebrew/core>
- **Deprecated:** yes
- **Disabled:** no
- **Keg Only:** no
- **URL Keys:** stable


## 関連リンク

- [Terminal utility packages](https://pkg.so/ja/terminal-utilities/) - Matched terminal and command-line workflow metadata.
- [Text processing packages](https://pkg.so/ja/text-processing-tools/) - Matched text, document, or structured-data processing metadata.
- [Developer build packages](https://pkg.so/ja/developer-build-tools/) - Matched build, compiler, generator, or developer workflow metadata.
- [Networking and protocol packages](https://pkg.so/ja/networking-protocol-tools/) - Matched network, protocol, or remote-service metadata.
- [ffmpeg](https://pkg.so/ja/brew/ffmpeg/) - Runtime dependency declared by Homebrew.
- [libtiff](https://pkg.so/ja/brew/libtiff/) - Runtime dependency declared by Homebrew.
- [graphviz](https://pkg.so/ja/brew/graphviz/) - Runtime dependency declared by Homebrew.
- [qt@5](https://pkg.so/ja/brew/qt-5/) - Runtime dependency declared by Homebrew.
- [cmake](https://pkg.so/ja/brew/cmake/) - Build dependency declared by Homebrew.
- [ninja](https://pkg.so/ja/brew/ninja/) - Build dependency declared by Homebrew.
- [doxygen](https://pkg.so/ja/brew/doxygen/) - Build dependency declared by Homebrew.
- [lcov](https://pkg.so/ja/brew/lcov/) - Shares pkgdb curated category or tags: cli, developer-tools, testing.
- [bats-core](https://pkg.so/ja/brew/bats-core/) - Shares pkgdb curated category or tags: cli, developer-tools, testing.
- [allure](https://pkg.so/ja/brew/allure/) - Shares pkgdb curated category or tags: cli, developer-tools, testing.
- [kcov](https://pkg.so/ja/brew/kcov/) - Shares pkgdb curated category or tags: cli, developer-tools, testing.
- [mockolo](https://pkg.so/ja/brew/mockolo/) - Shares pkgdb curated category or tags: cli, developer-tools, testing.
- [mailpit](https://pkg.so/ja/brew/mailpit/) - Shares pkgdb curated category or tags: cli, developer-tools, email, smtp, testing.
- [mockery](https://pkg.so/ja/brew/mockery/) - Shares pkgdb curated category or tags: cli, developer-tools, testing.
- [pytest](https://pkg.so/ja/brew/pytest/) - Shares pkgdb curated category or tags: cli, developer-tools, testing.
- [maildev](https://pkg.so/ja/npm/maildev/) - Local package facts share a topical domain. Shared terms: cli, developer, developer-tools, development, email.
- [localstack](https://pkg.so/ja/brew/localstack/) - Local package facts share a topical domain. Shared terms: cli, developer, developer-tools, development, local.
- [mailcatcher](https://pkg.so/ja/brew/mailcatcher/) - Local package facts share a topical domain. Shared terms: cli, developer, developer-tools, development, email.

## Combined YAML source

View the package source record on GitHub. [combined/morpheus.yml](https://github.com/mxcl/pkgdb/blob/main/combined/morpheus.yml)


## ソース

- pkg.so package database
- Geiger risk classifier
- package-page enrichment
- curated package history
- package version freshness
- pkgdb category and tag curation
- package relationship graph
- cross-ecosystem install command graph
