# Installer minibwa avec Homebrew

Consultez les chemins d'installation, exécutables, métadonnées et notes de sécurité de minibwa pour les workflows d'agents IA.

## installation

```sh
sudo av install brew:minibwa
```

Commandes d'installation supplémentaires:

### macOS

- Homebrew (100%):

```sh
brew install minibwa
```

  Preuve: local Homebrew formula metadata

## Faits du paquet

- **Clé du paquet:** brew:minibwa
- **Gestionnaire de paquets:** Homebrew
- **Version:** 0.6
- **Résumé source:** Successor of BWA-MEM for short-read alignment
- **Page d'accueil:** <https://github.com/lh3/minibwa>
- **Dépôt:** <https://github.com/lh3/minibwa>
- **Dernière mise à jour:** 2026-07-30T15:48:22Z
- **Généré:** 2026-08-03T19:37:03+00:00

## exécutables

- minibwa (alias)

## Comportement d'installation

- Bouteille: non disponible

## Version et fraîcheur

- page générée: 2026-08-03
- version du gestionnaire: 0.6
## Historique du projet et usages

minibwa is a genomic read aligner from the BWA/minimap2 lineage. The repository identifies it as the successor of BWA-MEM for short-read alignment, and the arXiv preprint by Heng Li and Nils Homer presents it as a next iteration of BWA-MEM for standard whole-genome short reads, Hi-C reads, accurate long reads, and directional bisulfite sequencing data.

### Historique du projet

The design deliberately mixes earlier tools by the same lineage: a BWA-MEM-style BWT/FM-index and variable-length seed search, ropebwt3-inspired supermaximal exact-match work, and minimap2-style chaining plus SIMD-based base alignment. The authors report comparable accuracy with much higher speed than BWA-MEM and BWA-MEM2, while noting that exact BWA-MEM compatibility is traded for algorithmic improvement.

### Modes d'utilisation

In practice, minibwa is a bioinformatics command-line aligner for pipelines that map sequencing reads to a reference genome before variant calling, methylation analysis, or related downstream analysis. Its package-manager niche is narrow but important: it gives genomics users an installable replacement candidate for BWA-MEM where performance and support for newer read types matter more than byte-for-byte legacy output.

### Sources

- <https://arxiv.org/abs/2606.15357>
- <https://arxiv.org/html/2606.15357v1>
- <https://github.com/lh3/bwa>
- <https://github.com/lh3/minibwa>


## Notes de sécurité

Aucun manifest local de gestion des secrets correspondant n'a été trouvé pour minibwa. Les métadonnées de paquet Nucleus restent publiées ici afin que la couverture future dispose d'une URL stable.



## Combined YAML source

View the package source record on GitHub. [combined/minibwa.yml](https://github.com/mxcl/pkgdb/blob/main/combined/minibwa.yml)


## Sources

- pkg.so package database
- curated package history
- pkgdb category and tag curation
- cross-ecosystem install command graph