# Installer nanoq avec Homebrew Consultez les chemins d'installation, exécutables, métadonnées et notes de sécurité de nanoq pour les workflows d'agents IA. ## installation ```sh sudo av install brew:nanoq ``` Commandes d'installation supplémentaires: ### macOS - Homebrew (100%): ```sh brew install nanoq ``` Preuve: local Homebrew formula metadata ## Faits du paquet - **Clé du paquet:** brew:nanoq - **Gestionnaire de paquets:** Homebrew - **Page du gestionnaire de paquets:** - **Version:** 0.10.0 - **Résumé source:** Minimal but speedy quality control and summaries of nanopore reads - **Page d'accueil:** - **Dépôt:** - **Licence:** MIT - **Archive source:** - **Dernière mise à jour:** 2026-07-14T06:59:42Z - **Généré:** 2026-08-04T22:13:35+00:00 ## exécutables - nanoq (cli) - nanoq (alias) ## Dépendances de compilation - rust ## Comportement d'installation - hook post-installation: non défini - Bouteille: disponible sur arm64_linux, arm64_sequoia, arm64_sonoma, arm64_tahoe, sonoma, x86_64_linux ## Version et fraîcheur - page générée: 2026-08-04 - version du gestionnaire: 0.10.0 - gestionnaire mis à jour: 2026-07-14 - données locales: OK - dépôt amont: https://github.com/esteinig/nanoq - dernière version détectée: 0.10.0 (à jour) ## Historique du projet et usages Nanoq is a Rust command-line utility for rapid filtering, trimming, quality control, and summary reporting of Oxford Nanopore FASTA/FASTQ reads. It is designed to work with files or Unix streams and emphasizes low memory use and high throughput. ### Historique du projet The public repository and first tagged releases appeared in March 2020. The project subsequently expanded its filters, reports, compression support, and machine-readable output, reaching the 0.8 series in 2021, 0.9.0 in 2022, and 0.10.0 in 2023. Steinig and Coin described Nanoq in the Journal of Open Source Software in 2022. ### Historique d'adoption Nanoq is distributed through Cargo, Conda/Bioconda, precompiled Linux and macOS release archives, and a Homebrew formula. Its official benchmarks position it alongside established sequencing utilities including NanoFilt, NanoStat, Filtlong, seqtk, SeqKit, and rust-bio-tools. ### Modes d'utilisation Users pass FASTA or FASTQ reads by file or standard input, apply length or quality filters and optional end trimming, and send surviving reads to a file or standard output. Statistics can be emitted as compact text, verbose summaries, or JSON; a fast mode skips quality-score calculation for greater throughput. ### Pourquoi les passionnés de paquets s'y intéressent Nanoq is notable as a small, single-purpose Rust CLI that composes naturally in Unix pipelines while being packaged across the Rust, bioinformatics, binary-release, and Homebrew ecosystems. Its benchmarked trade-off between full quality calculations and an exceptionally fast quality-free mode makes it useful when choosing lightweight tools for large sequencing streams. ### Chronologie - 2020: First public tagged releases. - 2021: The 0.8 release series broadened the mature CLI. - 2022: Nanoq was published in the Journal of Open Source Software and version 0.9.0 was released. - 2023: Version 0.10.0 was released. ### Related projects - NanoFilt and NanoStat provide nanopore filtering and statistics workflows used as official benchmark comparisons. - Filtlong, seqtk, SeqKit, and rust-bio-tools are neighboring read-processing tools compared in Nanoq's official benchmarks. - Needletail and niffler provide Nanoq's read-processing and compression foundations. ### Sources - - - - source_facts.package-manager.brew ## Notes de sécurité Aucun manifest local de gestion des secrets correspondant n'a été trouvé pour nanoq. Les métadonnées de paquet restent publiées ici afin que la couverture future dispose d'une URL stable. ## Détails de la base source - **Source Database:** Homebrew formula API - **Tap:** homebrew/core - **Full Name:** nanoq - **Version Scheme:** 0 - **Revision:** 0 - **Head Version:** HEAD - **Bottle Stable Root URL:** - **Deprecated:** no - **Disabled:** no - **Keg Only:** no - **URL Keys:** head, stable ## Liens liés - [Source-control packages](https://pkg.so/fr/source-control-tools/) - Belongs to a source-control command family. - [Terminal utility packages](https://pkg.so/fr/terminal-utilities/) - Matched terminal and command-line workflow metadata. - [Language runtime packages](https://pkg.so/fr/language-runtime-packages/) - Matched language runtime, compiler, or interpreter metadata. - [Networking and protocol packages](https://pkg.so/fr/networking-protocol-tools/) - Matched network, protocol, or remote-service metadata. - [rust](https://pkg.so/fr/brew/rust/) - Build dependency declared by Homebrew. - [fastqc](https://pkg.so/fr/brew/fastqc/) - Shares pkgdb curated category or tags: bioinformatics, cli, fastq, quality-control, science. - [fastp](https://pkg.so/fr/brew/fastp/) - Shares pkgdb curated category or tags: bioinformatics, cli, fastq, quality-control, science. - [trim-galore](https://pkg.so/fr/brew/trim-galore/) - Shares pkgdb curated category or tags: bioinformatics, cli, fastq, quality-control, rust. - [bbtools](https://pkg.so/fr/brew/bbtools/) - Shares pkgdb curated category or tags: bioinformatics, cli, quality-control, science, sequencing. - [adapterremoval](https://pkg.so/fr/brew/adapterremoval/) - Shares pkgdb curated category or tags: bioinformatics, cli, fastq, science, sequencing. - [rasusa](https://pkg.so/fr/brew/rasusa/) - Shares pkgdb curated category or tags: bioinformatics, cli, fastq, science, sequencing. - [fastq-tools](https://pkg.so/fr/brew/fastq-tools/) - Shares pkgdb curated category or tags: bioinformatics, cli, fastq, science, sequencing. - [sickle](https://pkg.so/fr/brew/sickle/) - Shares pkgdb curated category or tags: bioinformatics, cli, fastq, science, sequencing. - [chopper](https://pkg.so/fr/brew/chopper/) - Both packages touch the same language runtime or ecosystem. Shared terms: bioinformatics, cli, fastq, quality, read. ## Combined YAML source View the package source record on GitHub. [combined/nanoq.yml](https://github.com/mxcl/pkgdb/blob/main/combined/nanoq.yml) ## Sources - pkg.so package database - package-page enrichment - curated package history - package version freshness - pkgdb category and tag curation - package relationship graph - cross-ecosystem install command graph