macOS
Homebrewverifiziert · 100%
brew install rasusalocal Homebrew formula metadata
brew / Rang 9805
rasusa mit Homebrew installieren
Prüfe Installationswege, Executables, Metadaten und Sicherheitshinweise für rasusa in AI-Agent-Workflows.
Installation
Weitere Installationsbefehle
Überblick
Paketzusammenfassung
Randomly subsample sequencing reads or alignments
Projektlinks
Befehle und Aliase
- rasusa
Verlauf
Projektgeschichte und Nutzung
Rasusa is a Rust command-line program for randomly downsampling sequencing reads or genome alignments, including targeting a requested sequencing coverage.
Projektgeschichte
Rasusa was created to randomly subsample sequencing reads to a requested coverage. Its methods and purpose were documented in a 2022 Journal of Open Source Software paper. The project subsequently expanded beyond FASTQ reads to support unaligned and aligned SAM, BAM, and CRAM workflows, with alignment downsampling documented in a 2026 Gigabyte paper.
Adoptionsgeschichte
Rasusa is available through precompiled release binaries, Cargo and cargo-binstall, Bioconda, containers, and Homebrew. The official README documents the shift of container distribution from Docker Hub to Quay.io and later to GitHub Container Registry.
Wie es verwendet wird
For reads, users supply FASTQ or unaligned SAM/BAM/CRAM input and request a coverage or other sampling target; results are written to standard output unless otherwise directed. Current releases also provide alignment-oriented downsampling. The CLI supports paired sequencing data and integrates readily into shell and bioinformatics pipelines.
Warum Paket-Nerds sich dafür interessieren
Rasusa packages a common bioinformatics preprocessing task into a fast, reproducible Rust executable with few operational complications. Its presence across Cargo, Bioconda, containers, and Homebrew illustrates how research software can bridge language-native, scientific-workflow, and general-purpose package ecosystems.
Zeitleiste
- 2022: Rasusa was described in the Journal of Open Source Software.
- Before 0.4.0: Official containers were hosted on Docker Hub.
- 0.4.0–2.2.0: Official containers were hosted on Quay.io.
- 2026: Efficient genome-alignment downsampling with Rasusa was described in Gigabyte.
Related projects
- Cargo and cargo-binstall distribute the Rust executable.
- Bioconda integrates Rasusa into bioinformatics package and workflow environments.
- SAM, BAM, CRAM, and FASTQ are the principal sequencing formats handled by the tool.
Quellen
Sicherheitslage
Risikostufe: grün
narrow executable package without higher-risk signals.
Risikoklassifikator
grün Risiko · niedrig Konfidenz · appliance
Warum
- narrow executable package without higher-risk signals
Signale
- metadata:no-higher-risk-signals
Installationsverhalten
- In den Formelmetadaten ist kein Homebrew-Post-install-Hook erfasst.
- Homebrew-Bottle-Metadaten sind für 6 Plattformziele verfügbar.
- Build-Metadaten listen 1 Build-Abhängigkeiten.
Empfohlene Prüfung
Prüfe vor unbeaufsichtigter Agent-Nutzung, ob das Tool Klartext-Credentials liest, Remote-Zustand schreibt, Artefakte veröffentlicht oder Plugins ausführt.
Executables
Installierte Executables
| Befehl | Art | Sichtbarkeit | Hinweis |
|---|---|---|---|
rasusa | cli | globales Executable |
Aktualität
Version und Aktualität
Diese Signale trennen das Alter der Seitengenerierung, Aktivität des Paketmanagers und Upstream-Release-Vergleich. Versionsrückstand wird nur gemeldet, wenn eine Evidenz-URL und vergleichbare Versionen vorhanden sind.
Seite generiert2026-09-19
Manager-Version5.1.0
Manager aktualisiert2026-09-13
lokale DatenOK
Upstreamaktuell
neueste erkannte Version5.1.0
https://github.com/mbhall88/rasusa
- OKEs wurden keine Aktualitätswarnungen generiert.
Installationsmetadaten
Paketmetadaten
| Paketschlüssel | brew:rasusa |
|---|---|
| Version | 5.1.0 |
| Paketmanager | Homebrew |
| Paketmanager-Seite | https://formulae.brew.sh/formula/rasusa |
| Homepage | https://doi.org/10.21105/joss.03941 |
| Repository | https://github.com/mbhall88/rasusa |
| Upstream-Dokumentation | https://doi.org/10.21105/joss.03941 |
| Lizenz | MIT |
| Quellarchiv | https://github.com/mbhall88/rasusa/archive/refs/tags/5.1.0.tar.gz |
| Zuletzt aktualisiert | 2026-09-13T07:18:51Z |
| Pulse | updated |
| Build-Abhängigkeiten | rust |
| Bottle | verfügbar (auf arm64_linux, arm64_sequoia, arm64_sonoma, arm64_tahoe, sonoma, x86_64_linux) |
| Homebrew post-install | nicht definiert |
| Dienst | keiner deklariert |
Registry-Fakten
Details aus der Quelldatenbank
| Source Database | Homebrew formula API |
|---|---|
| Tap | homebrew/core |
| Full Name | rasusa |
| Version Scheme | 0 |
| Revision | 0 |
| Head Version | HEAD |
| Bottle Stable Root URL | https://ghcr.io/v2/homebrew/core |
| Deprecated | no |
| Disabled | no |
| Keg Only | no |
| URL Keys |
|
Quellspur
Aus Repository-Daten generiert
Diese Seite wird von av-web aus dem privaten Paket-SQLite-Artefakt bereitgestellt, das scripts/generate-pkg-sqlite.py erstellt.
Combined YAML source
View the package source record on GitHub.
Verwendete Quellen
- Geiger risk classifier
- cross-ecosystem install command graph
- curated package history
- package relationship graph
- package version freshness
- package-page enrichment
- pkg.so package database
- pkgdb category and tag curation