macOS
brew install minibwalocal Homebrew formula metadata
brew / Rang 10313
Prüfe Installationswege, Executables, Metadaten und Sicherheitshinweise für minibwa in AI-Agent-Workflows.
Installation
brew install minibwalocal Homebrew formula metadata
Überblick
Successor of BWA-MEM for short-read alignment
Verlauf
minibwa is a genomic read aligner from the BWA/minimap2 lineage. The repository identifies it as the successor of BWA-MEM for short-read alignment, and the arXiv preprint by Heng Li and Nils Homer presents it as a next iteration of BWA-MEM for standard whole-genome short reads, Hi-C reads, accurate long reads, and directional bisulfite sequencing data.
The design deliberately mixes earlier tools by the same lineage: a BWA-MEM-style BWT/FM-index and variable-length seed search, ropebwt3-inspired supermaximal exact-match work, and minimap2-style chaining plus SIMD-based base alignment. The authors report comparable accuracy with much higher speed than BWA-MEM and BWA-MEM2, while noting that exact BWA-MEM compatibility is traded for algorithmic improvement.
In practice, minibwa is a bioinformatics command-line aligner for pipelines that map sequencing reads to a reference genome before variant calling, methylation analysis, or related downstream analysis. Its package-manager niche is narrow but important: it gives genomics users an installable replacement candidate for BWA-MEM where performance and support for newer read types matter more than byte-for-byte legacy output.
Sicherheitslage
Für minibwa wurde kein passendes lokales Secret-Handling-Manifest gefunden. Paketmetadaten bleiben hier veröffentlicht, damit künftige Abdeckung eine stabile Paket-URL hat.
Prüfe vor unbeaufsichtigter Agent-Nutzung, ob das Tool Klartext-Credentials liest, Remote-Zustand schreibt, Artefakte veröffentlicht oder Plugins ausführt.
Executables
| Befehl | Art | Sichtbarkeit | Hinweis |
|---|---|---|---|
minibwa | cli | globales Executable |
Aktualität
Diese Signale trennen das Alter der Seitengenerierung, Aktivität des Paketmanagers und Upstream-Release-Vergleich. Versionsrückstand wird nur gemeldet, wenn eine Evidenz-URL und vergleichbare Versionen vorhanden sind.
https://github.com/lh3/minibwa
Installationsmetadaten
| Paketschlüssel | brew:minibwa |
|---|---|
| Version | 0.6 |
| Paketmanager | Homebrew |
| Paketmanager-Seite | https://formulae.brew.sh/formula/minibwa |
| Homepage | https://github.com/lh3/minibwa |
| Repository | https://github.com/lh3/minibwa |
| Lizenz | MIT AND Apache-2.0 |
| Quellarchiv | https://github.com/lh3/minibwa/archive/refs/tags/v0.6.tar.gz |
| Zuletzt aktualisiert | 2026-07-30T15:48:22Z |
| Pulse | updated |
| Bottle | verfügbar (auf arm64_linux, arm64_sequoia, arm64_sonoma, arm64_tahoe, sonoma, x86_64_linux) |
| Homebrew post-install | nicht definiert |
| Dienst | keiner deklariert |
Registry-Fakten
| Source Database | Homebrew formula API |
|---|---|
| Tap | homebrew/core |
| Full Name | minibwa |
| Version Scheme | 0 |
| Revision | 0 |
| Bottle Stable Root URL | https://ghcr.io/v2/homebrew/core |
| Deprecated | no |
| Disabled | no |
| Keg Only | no |
| URL Keys |
|
Quellspur
Diese Seite wird von av-web aus dem privaten Paket-SQLite-Artefakt bereitgestellt, das scripts/generate-pkg-sqlite.py erstellt.
View the package source record on GitHub.